PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028109315.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 346aa MW: 40130.7 Da PI: 8.2678

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028109315.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.5	3.9e-12	33	98	24	91
FAR1 24 rngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++ge Cs++gkr ++++ + +++ +t++gCka+++ +++kdg++++t+++l+HnH+l p XP_028109315.1 33 NDGELRYFGIECSRSGKRIKKSEV--NPLKPSLSTKIGCKARVRATLQKDGRFMLTTVNLDHNHDLIP 98 67777778889*****998766..999**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MENGSNSAEN PLLNESEKVE EPKRAYKTQV CGNDGELRYF GIECSRSGKR IKKSEVNPLK 60 PSLSTKIGCK ARVRATLQKD GRFMLTTVNL DHNHDLIPTD SRHFAMNKKI LTPMKRRLEI 120 NDQVGIGVSR NYHSMVVEAG GYESLTFDER DARNYIDRAR KLRLGEGDSD ALQKYFLRMH 180 SQNSSFYYMI DVDTDFRIRN LFWADAMSRA AYKEFGDVVS FDTTYLTNKY DMPFALFVGV 240 NHHGQSILLG CGQLSSEDID IFVWLFKSWL NCMSDHHPKA IITDQCKAMQ NAIEIVFPNT 300 RHRWCLWHIM KKIPEKLKGY SQYESMKMDL QNAVYDTFTK DEFEMK

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MENGSNSAEN PLLNESEKVE EPKRAYKTQV CGNDGELRYF GIECSRSGKR IKKSEVNPLK  60
PSLSTKIGCK ARVRATLQKD GRFMLTTVNL DHNHDLIPTD SRHFAMNKKI LTPMKRRLEI  120
NDQVGIGVSR NYHSMVVEAG GYESLTFDER DARNYIDRAR KLRLGEGDSD ALQKYFLRMH  180
SQNSSFYYMI DVDTDFRIRN LFWADAMSRA AYKEFGDVVS FDTTYLTNKY DMPFALFVGV  240
NHHGQSILLG CGQLSSEDID IFVWLFKSWL NCMSDHHPKA IITDQCKAMQ NAIEIVFPNT  300
RHRWCLWHIM KKIPEKLKGY SQYESMKMDL QNAVYDTFTK DEFEMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-71	FAR1 family protein