PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028109693.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 687aa MW: 79815 Da PI: 8.0227

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028109693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86	5.6e-27	36	124	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+r+++ +ks+++g +t+r+fvC keg+r+++k+ + +++r+etrt+Cka ++++ ++ +kw v+k++++HnH+l XP_028109693.1 36 EFYNEYGRIVGFSIRRDYCNKSQKDGVMTSRKFVCCKEGERKKDKRY-TMIKNPRSETRTNCKAFMHISFKRdLSKWIVSKFDSNHNHPL 124 6*****************************************999.99***************999799***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence
MDDGGLEGCI EEMGELAKDK SPYLGMELLS EEAAYEFYNE YGRIVGFSIR RDYCNKSQKD 60 GVMTSRKFVC CKEGERKKDK RYTMIKNPRS ETRTNCKAFM HISFKRDLSK WIVSKFDSNH 120 NHPLHLPQCT HLMPSQRKVC DAQGINIDIA DESGISLKAS HDLISAIAGG KKFVGFTRED 180 QKTYLRAKRQ RNLQYGEAGS LLRYFQQQVA ENPYFYYAIQ LDVDEMITNI FWADHQMITD 240 YGLFGDAVSF DTTFRTNKEY RPLALFCGFN HFRMTVIFGA ALLYDETAES FEWLFETFLD 300 AMLGKKPVSF FTDQDQAMAK AISQIMPEVF HGLCTFHLMQ NALKHLGYLF KSGSKFSSDL 360 KACIYDYENE DELIEAWNSL IDKYNLQENE WMKRTWRKRE QWAHVYMKWI VVDKRYEEIS 420 AIYDSRQKLP RMKLKKSPIL IQVRSLYTPP IFDLFHCELD TSLCCQVKQF HELEGEVKCV 480 IGLYGNGKEY IVEGRVEVIG LRGEKSCQEI HCTCKKFENF GILYSHAIKA LDRMNVMKIP 540 ERYILGRWRL DAKDCEVEEK NVVVDEDDPK LLILARYRDL CPRMVKLATQ ASMHKPAYQL 600 VDEGIKELCV KVNNMMKGVG SFGTNELDVD DPNITQVKGI KKKDVGHKGR GRLKPWHEMM 660 NKKTKVISQP TRLSKVLPTY FWESVGL

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence

MDDGGLEGCI EEMGELAKDK SPYLGMELLS EEAAYEFYNE YGRIVGFSIR RDYCNKSQKD  60
GVMTSRKFVC CKEGERKKDK RYTMIKNPRS ETRTNCKAFM HISFKRDLSK WIVSKFDSNH  120
NHPLHLPQCT HLMPSQRKVC DAQGINIDIA DESGISLKAS HDLISAIAGG KKFVGFTRED  180
QKTYLRAKRQ RNLQYGEAGS LLRYFQQQVA ENPYFYYAIQ LDVDEMITNI FWADHQMITD  240
YGLFGDAVSF DTTFRTNKEY RPLALFCGFN HFRMTVIFGA ALLYDETAES FEWLFETFLD  300
AMLGKKPVSF FTDQDQAMAK AISQIMPEVF HGLCTFHLMQ NALKHLGYLF KSGSKFSSDL  360
KACIYDYENE DELIEAWNSL IDKYNLQENE WMKRTWRKRE QWAHVYMKWI VVDKRYEEIS  420
AIYDSRQKLP RMKLKKSPIL IQVRSLYTPP IFDLFHCELD TSLCCQVKQF HELEGEVKCV  480
IGLYGNGKEY IVEGRVEVIG LRGEKSCQEI HCTCKKFENF GILYSHAIKA LDRMNVMKIP  540
ERYILGRWRL DAKDCEVEEK NVVVDEDDPK LLILARYRDL CPRMVKLATQ ASMHKPAYQL  600
VDEGIKELCV KVNNMMKGVG SFGTNELDVD DPNITQVKGI KKKDVGHKGR GRLKPWHEMM  660
NKKTKVISQP TRLSKVLPTY FWESVGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-98	FAR1 family protein