PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028109725.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 256aa    MW: 29525 Da    PI: 6.0925
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028109725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.28e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ ++++G ++W++ ++  g+ R++k+c++rw +yl
   XP_028109725.1 14 KGPWTPEEDLILINFINLHGHPNWRSLPKQAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding53.74.8e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l
   XP_028109725.1  67 RGNFTREEEDAIIELHEKLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MVRAPCCEKM GLKKGPWTPE EDLILINFIN LHGHPNWRSL PKQAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF TREEEDAIIE LHEKLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLSQNM  120
TTPVTKQPQS TTNIQIYDQI TQKESEPMNY YPNQVRLQSP QHSSSDISSV TTTTWMKGDE  180
LDNFFEVDDN FWSEVFSADN SGTMNDFLAT TADPQVQFQF SPIDGAEHAH GYNPSVDYYW  240
YNLLTTAGEL PNLTEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-76MYB family protein