PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028109794.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 143aa    MW: 16840.1 Da    PI: 6.7948
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028109794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.95.7e-1265109246
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekk 46 
                     fYn+YAk +GFs+r+++++ s +n+ + +r++vCs+eg re++  
  XP_028109794.1  65 FYNAYAKVIGFSIRRNRKRISGDNKFVESRKWVCSREGVREKKYL 109
                     ****************************************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MNEPESSRHK EVNTEIDDQF APDGKDDVVD VKEGLASQTH DSLRMLTKED VLQMKFNLED  60
DAYTFYNAYA KVIGFSIRRN RKRISGDNKF VESRKWVCSR EGVREKKYLQ HVERVLPWWV  120
FVHIFNHFDC MGLFLASIHV GWA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.11e-07FAR1 family protein