PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028109848.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 196aa    MW: 22305.4 Da    PI: 9.3212
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028109848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-10130173654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++Err R+++N+++  Lr+++Pk +      K++ a+iL  A+eY+k+L
  XP_028109848.1 130 LMAERRQRKKLNDRLYMLRSVVPKiN------KMDRASILGDAIEYLKEL 173
                     589*********************77......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
TQPTLFQKRA ALRQSSAARA INLENLDLRR DTEVSARADG NWGKTLDDGE LEKKRKINDE  60
DEYEEASIDV SGLNYDSSDE SFGIKKVNES EDTNNGGNNN SNANTTVTTV VVGDDQKEKG  120
KKKGLPTKNL MAERRQRKKL NDRLYMLRSV VPKINKMDRA SILGDAIEYL KELLQRIMXL  180
NXQQQNQRQI DQIRVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.12e-26bHLH family protein