PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110038.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 321aa    MW: 35589.6 Da    PI: 6.2415
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.62.6e-0954103154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r++ +  rE+ RRdr+N+ f  L   l ++     +K++Ka+iL+ +++ +k+L
  XP_028110038.1  54 RKVQKADREKLRRDRLNEHFLDLGNALDPD----RPKNDKATILTDTIQVLKDL 103
                     5677889********************997....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MDQWETNDFS QPLDSNHVPT TTSVHCTLLH PLPNSLPEPR QMPEVEVKDP IAARKVQKAD  60
REKLRRDRLN EHFLDLGNAL DPDRPKNDKA TILTDTIQVL KDLTAEVNRL KAECAALSEE  120
SRELTQEKNE LRGEKASLKS DIDNLNLQYQ QRLAAMFPWT TIDPSVVMAS PFSYPVPLTV  180
PPGPIPMHHP AMQPFPFFGN QNPGAIPNSC STFIPYPSLA NHHIDQPSYQ CASTSRISSK  240
QDSKCKISDH CRGSNDDKSD DSNDVVTELE LKTPGSTVQQ SPGERKSKKP LRKGKSIVDG  300
SSSSGYSSSQ GFQDSSSNNT Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.23e-71bHLH family protein