PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110050.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

SBP

Protein Properties

Length: 199aa MW: 21654.1 Da PI: 8.7594

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110050.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133	9.6e-42	73	150	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C+adl+eak+yhrrhkvCe h+ka+vv+v+gl+qrfCqqCsrfhelsefD++krsCr+rLa+hnerrrk+++ XP_028110050.1 73 RCQAEKCAADLTEAKRYHRRHKVCELHAKASVVVVAGLRQRFCQQCSRFHELSEFDNTKRSCRTRLAGHNERRRKSSS 150 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MEALQPNPSP VSKNKAAEEC AAADDDDDDS MEEKEEQEEC YGGVKKKKKV VFVCGGGSGG 60 KKGCGGSGGG GGRCQAEKCA ADLTEAKRYH RRHKVCELHA KASVVVVAGL RQRFCQQCSR 120 FHELSEFDNT KRSCRTRLAG HNERRRKSSS ESRGEGSGSG CPSLSLQLSQ SQADDHYRGK 180 KTSLTAFPGK PTYKQFHIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	7e-34	SBP family protein