PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110099.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 287aa    MW: 33546 Da    PI: 6.4423
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.95.2e-113415289
            FAR1 52 rrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                    +++r+etrt+Cka ++++ ++  +kw v+k++++HnH+l
  XP_028110099.1  3 KNPRSETRTNCKAFMHISFKRdLSKWIVSKFDNNHNHPL 41
                    67899*************999799*************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MIKNPRSETR TNCKAFMHIS FKRDLSKWIV SKFDNNHNHP LHLPQCTHLM PSQRKASHEL  60
ISAIAGGNEF VGFTQEDQKT YLHAKRQRNL QYGEAESLLR CFQQQVAENS YFYYAIQLDV  120
NEMITNIFWA DHQMITNYGL FGDAVSFDTT FRTNKEYRPL ALFCGFNHFR MTVIFGAALL  180
YDETTESFEW LFETFFDAMS GKKLVSFFTD QDQAMAKAIS QIMPEVFHGL CTFHLMQNAL  240
KHLGYLFKSG SKFSSDLKAC IYDYENEHEL IEAWNSLIDK YNLQENE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-60FAR1 family protein