PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110202.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 691aa MW: 79662.6 Da PI: 7.481

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	41.1	5.8e-13	36	89	1	48
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......t 48 +fYneY++ vGFs+r+++ +ks+++g +t+r+fvC keg+re++k+ + XP_028110202.1 36 EFYNEYGRIVGFSIRRDYCNKSQKDGVMTSRKFVCCKEGEREKDKRMevvgftR 89 6******************************************99884544431 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MDDGGLEGCI EEMGELAKDK SPYHGMEFPS KETAYEFYNE YGRIVGFSIR RDYCNKSQKD 60 GVMTSRKFVC CKEGEREKDK RMEVVGFTRE DQKTYLRAKR QRNLQYGEAG SLLRYFQQQV 120 AENPYFYNAI QLDVDEMITS IFWADHQMIT DYGLFGDAVS FDTTFRTNKE YRPLALFCGF 180 NHFRMTVIFG AGLLYDETAE SFEWLFETFL DAMSGKKPVS FFTDQDQAMA KAISQIMPEV 240 FHELCTFHLM QNTLKHLGYL FKSGSKFSSD LKACIYDYEN EHELIEAWNS LIDKYNMQEN 300 EWMKRTWRKR EQWAHVYMKW VFTGGMRSTQ LSESLNGTLR GYLKGDHNIV QFFTHFNRIV 360 VDKRYEEISA IYDSRQKLPR MKLKKSPILI QVASLYTPPI FDLFHCELDT SLCCQVKQFH 420 ELEGEVKCVI GLYGNGKEYI VEGRVEVIGL RGEKSCQEIH CTCKKFENFG ILCSHAIKAL 480 DRMNVMKIPE RYILGRWRLD AKDCEVEEKN VVVDEDDPKL LILARYRDLC PRMVKLATQA 540 SMHKPAYQLV DEGIKELCVK VNNMMKGVGS FGTNELDVDD PNITQVKGIK KKDVGHKGRG 600 RLKPWHEMMN KKTKVISQPT RLSKTIGQSS NTTNVQNSSS SQQQTIGQSS NTTNVQNSSS 660 SQQQTIGQSS NTTNVQNSSS SQQQTIGHEG F

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MDDGGLEGCI EEMGELAKDK SPYHGMEFPS KETAYEFYNE YGRIVGFSIR RDYCNKSQKD  60
GVMTSRKFVC CKEGEREKDK RMEVVGFTRE DQKTYLRAKR QRNLQYGEAG SLLRYFQQQV  120
AENPYFYNAI QLDVDEMITS IFWADHQMIT DYGLFGDAVS FDTTFRTNKE YRPLALFCGF  180
NHFRMTVIFG AGLLYDETAE SFEWLFETFL DAMSGKKPVS FFTDQDQAMA KAISQIMPEV  240
FHELCTFHLM QNTLKHLGYL FKSGSKFSSD LKACIYDYEN EHELIEAWNS LIDKYNMQEN  300
EWMKRTWRKR EQWAHVYMKW VFTGGMRSTQ LSESLNGTLR GYLKGDHNIV QFFTHFNRIV  360
VDKRYEEISA IYDSRQKLPR MKLKKSPILI QVASLYTPPI FDLFHCELDT SLCCQVKQFH  420
ELEGEVKCVI GLYGNGKEYI VEGRVEVIGL RGEKSCQEIH CTCKKFENFG ILCSHAIKAL  480
DRMNVMKIPE RYILGRWRLD AKDCEVEEKN VVVDEDDPKL LILARYRDLC PRMVKLATQA  540
SMHKPAYQLV DEGIKELCVK VNNMMKGVGS FGTNELDVDD PNITQVKGIK KKDVGHKGRG  600
RLKPWHEMMN KKTKVISQPT RLSKTIGQSS NTTNVQNSSS SQQQTIGQSS NTTNVQNSSS  660
SQQQTIGQSS NTTNVQNSSS SQQQTIGHEG F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-80	FAR1 family protein