PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110207.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 185aa    MW: 21149 Da    PI: 6.5052
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.61.8e-2741129189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYneY++ vGFs+ +++ +ksk++g +t+r+fvC keg+re++k+  +  +++r+etrt+C+a ++++ ++  +kw v+k++++HnH+l
  XP_028110207.1  41 EFYNEYGRIVGFSIIRDYCNKSKKDGVMTSRKFVCCKEGEREKDKRY-TMIKNPRSETRTNCNAFMHISFKRdLSKWIVSKFDSNHNHPL 129
                     6*******************************************999.99*******************999799*************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MEDGIMDDGG LEGCIEEMRE LAKDKSPYLG MEFPSEEAAY EFYNEYGRIV GFSIIRDYCN  60
KSKKDGVMTS RKFVCCKEGE REKDKRYTMI KNPRSETRTN CNAFMHISFK RDLSKWIVSK  120
FDSNHNHPLH LPQCTHLMPS QRKVCDAQSI NIDIADQTGI SLKASHDLIS AIAGGKEFVG  180
FTRED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-27FAR1 family protein