PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110325.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 123aa    MW: 13882.8 Da    PI: 5.7949
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110325.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.21.7e-2044113172
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                     +fYn+Y  +vGFs+rk++ +ks ++geit+rtfvCskeg r+++k++    r +raetrtgC a + +k+ +
  XP_028110325.1  44 EFYNSYVGRVGFSIRKEYAHKS-KTGEITSRTFVCSKEGLRKSDKRD-FAVRIPRAETRTGCGALMSIKLIR 113
                     6******************999.7888*****************999.9999****************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MEVLDISKMD DLTIATQMDV HGEDDTECKS ILGMEFDSEQ SAYEFYNSYV GRVGFSIRKE  60
YAHKSKTGEI TSRTFVCSKE GLRKSDKRDF AVRIPRAETR TGCGALMSIK LIRQIGSIEL  120
SIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.24e-17FAR1 family protein