PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110326.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

DBB

Protein Properties

Length: 317aa MW: 34658.6 Da PI: 7.674

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.3	2.8e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ e++ fC ++ lC+ C H+ H+ XP_028110326.1 4 QCDVCNKDEASVFCSADEAALCAACDHRVHHAnklagkHQ 43 7****99****************9964446666665 PP
2	zf-B_box	28.9	2.4e-09	56	93	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Htv 39 + C+ ++ek++ lfC++++ lC++C ++H+ Ht+ XP_028110326.1 56 PLCDICQEKRAFLFCQQDRAILCRNCDISIHEAneHTR 93 78*****************************6678875 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MKIQCDVCNK DEASVFCSAD EAALCAACDH RVHHANKLAG KHQRFALQHP SPKQFPLCDI 60 CQEKRAFLFC QQDRAILCRN CDISIHEANE HTRNHDRFLL TGVKLSATSS LYSSQSSSDS 120 SAANNDLLPN LKSQNSIATT TNSNKPIALQ PTIAKTVTAE TVVATTANKG VEGGAATSSI 180 SEYLTETLPG WRVDDFLDSS SPTSFGIYKT VVDEVMPLWD GDLESNLGSF SSPNNVGIWV 240 PQAPPPQYPH QYSSPNMGFG NQIGFKESKE ATINKNKNNN NDNNNKSGRK WRDGGCFIVP 300 QISPSSIAAS KRSRTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	5e-76	DBB family protein