PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110333.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 849aa MW: 98102.3 Da PI: 7.8724

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.3	1.2e-23	29	117	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+r+++++ksk++g +++r+fvC keg++e++k+ + ++++ etrt+C+a + ++ ++ +kw+++k++ +HnH l XP_028110333.1 29 EFYNEYGRIVGFSIRRDYHTKSKKDGIMINRKFVCCKEGEKEKDKRY-ITVKHPQHETRTKCNAFMYISFRRdLSKWVLMKCDDNHNHLL 117 6*****************************************999.99999************999899***********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 849 aa Download sequence
MEDGALEKLA NNSMPYVGME FDSEEGAYEF YNEYGRIVGF SIRRDYHTKS KKDGIMINRK 60 FVCCKEGEKE KDKRYITVKH PQHETRTKCN AFMYISFRRD LSKWVLMKCD DNHNHLLHIP 120 QCTHMMPSQR KLCDAQGINV DVADDTGISL KASHDLISAL AGLKEFVGFT REDQKTYLRA 180 KRQRNLQYGE AGRLLRYFQQ QAIGNPYFYF AFQLDVDEMI TNIFWADHQM ITDFGIFGDV 240 VSFDTTFRTN KEYRPLALFT GFNHFRMTVI FGAALLYDET TASFEWLFET FLHAMSGKKP 300 VSFFTDQDQA MAKAISKIMP EVFHRLCTFH LMQNVLKHLG YLFKGGLKFG CDFKTCIFGH 360 EDEHELVEAW DSLIHKYNLQ ENLWIKKTWE LREKWAHVYM KLVYTARMRS TQLSESLNTE 420 LKRHLKVDHN IVQFFTHFNR VVMDKRYEEV KAIYDSRQRL PRIKLKMSPM LIQVAKLYTP 480 PIFGLFHNEL DTSLCCQVKR CHALGREVTY VIGLYGEDRE YVVKCNMEVN ESGGDNICHE 540 IHCTCQKFES FGILCGHAIK ALDRMNIMEI PERYILGRWR LNAKDCAIEE TVTVVENDPK 600 LVIAARYRDL CPRMVKLAAR SSEYKPAYQL VDETLKDLCA KVDNMMTSLD SSGASGSDGN 660 IEVGTKEFVV DPNFARAKGL KKKEGGHKGG SRLKPWHEKT TKRTKVVSQP TRLTQSIGQS 720 SDTRNIQNSS SNHIPDVDVP YWPQLMNSGY NLLMHDVNFA CPPTNPQSTP LSSQASHNPQ 780 SSQMCNILGL GFDLAEHSPM VDESVFQHQI VYIGHGFKVY LRRNNCYWCY ETALSENCYL 840 TNCSIVEKN

Sequence ? help Back to Top

Protein Sequence Length: 849 aa Download sequence

MEDGALEKLA NNSMPYVGME FDSEEGAYEF YNEYGRIVGF SIRRDYHTKS KKDGIMINRK  60
FVCCKEGEKE KDKRYITVKH PQHETRTKCN AFMYISFRRD LSKWVLMKCD DNHNHLLHIP  120
QCTHMMPSQR KLCDAQGINV DVADDTGISL KASHDLISAL AGLKEFVGFT REDQKTYLRA  180
KRQRNLQYGE AGRLLRYFQQ QAIGNPYFYF AFQLDVDEMI TNIFWADHQM ITDFGIFGDV  240
VSFDTTFRTN KEYRPLALFT GFNHFRMTVI FGAALLYDET TASFEWLFET FLHAMSGKKP  300
VSFFTDQDQA MAKAISKIMP EVFHRLCTFH LMQNVLKHLG YLFKGGLKFG CDFKTCIFGH  360
EDEHELVEAW DSLIHKYNLQ ENLWIKKTWE LREKWAHVYM KLVYTARMRS TQLSESLNTE  420
LKRHLKVDHN IVQFFTHFNR VVMDKRYEEV KAIYDSRQRL PRIKLKMSPM LIQVAKLYTP  480
PIFGLFHNEL DTSLCCQVKR CHALGREVTY VIGLYGEDRE YVVKCNMEVN ESGGDNICHE  540
IHCTCQKFES FGILCGHAIK ALDRMNIMEI PERYILGRWR LNAKDCAIEE TVTVVENDPK  600
LVIAARYRDL CPRMVKLAAR SSEYKPAYQL VDETLKDLCA KVDNMMTSLD SSGASGSDGN  660
IEVGTKEFVV DPNFARAKGL KKKEGGHKGG SRLKPWHEKT TKRTKVVSQP TRLTQSIGQS  720
SDTRNIQNSS SNHIPDVDVP YWPQLMNSGY NLLMHDVNFA CPPTNPQSTP LSSQASHNPQ  780
SSQMCNILGL GFDLAEHSPM VDESVFQHQI VYIGHGFKVY LRRNNCYWCY ETALSENCYL  840
TNCSIVEKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-108	FAR1 family protein