PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110409.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 240aa MW: 27573.2 Da PI: 8.5981

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110409.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	148.9	2.4e-46	3	133	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +pGfrF Pt+eelv++yL+ k++g+++++++vi+ +diy++ePw+Lpk +++e+++w+fF++r++++a+g r++r+t+sg+Wkatg+ v XP_028110409.1 3 APGFRFYPTEEELVSFYLRTKLQGNRHDINRVIPVIDIYEHEPWHLPKlsgeVCHGETEQWFFFAPRQEREARGGRPTRTTASGFWKATGSPSYV 97 59*************************99************656754455777******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ ++++g+kkt+vfykg+ap+g+kt+W m+eyr+ XP_028110409.1 98 YSSFNRVIGVKKTMVFYKGKAPSGRKTKWKMNEYRA 133 9*****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MEAPGFRFYP TEEELVSFYL RTKLQGNRHD INRVIPVIDI YEHEPWHLPK LSGEVCHGET 60 EQWFFFAPRQ EREARGGRPT RTTASGFWKA TGSPSYVYSS FNRVIGVKKT MVFYKGKAPS 120 GRKTKWKMNE YRAIEEESPS QCGTTVPKLR HELSLCRVYV VSGSFRAFDR RPLAAETSEA 180 INQQDHGHGT VMKPSQATRT ISPETSWSEE KHFELPVNNL GVVNGSEPLW ELEKLDCLFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44350.2	4e-89	NAC family protein