PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110428.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 311aa    MW: 36099.4 Da    PI: 7.2231
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR151.82.7e-165851090
            FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                     G  +r+++ +++k +++  +r +vC+keg+ + +k++   ++++raetr+gC+a+l vk+++   k++vt+++++HnH+l+
  XP_028110428.1  5 WGLALRMDYCRTNKFTNQLLCRLLVCNKEGFWKVDKRD-PLAKNPRAETRIGCEAQLYVKLDEgIRKFVVTDFKEKHNHDLV 85
                    68889999999***********************9999.999*********************99***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEEEWGLALR MDYCRTNKFT NQLLCRLLVC NKEGFWKVDK RDPLAKNPRA ETRIGCEAQL  60
YVKLDEGIRK FVVTDFKEKH NHDLVSPECA HMLSSQRKKS PTQAIELDLA ASGLHLGQSF  120
ELMGREAGGR QCLGFTKLDQ KNYLRTKRQQ SLTYGKLDNE EQITNMFWAD AQMIIDYVQF  180
GDVVTFDTTY KLNKEHRPFA SFVEFNQHRE TVIFGAALLY DETANSFAWL FQNFLEAMSR  240
KAPKTLFTDQ DAAMAKAMPI VMPDTSHRLC TWHLMQNALK HVNCLFQDKG VKGVLNKFLF  300
DIEDENQWKL E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-58FAR1 family protein