PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110499.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 183aa MW: 20635.4 Da PI: 8.4064

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.5e-18	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+d+++ +G g+W+t ++ g++R++k+c++rw +yl XP_028110499.1 13 KGAWTKQEDQKLIDYIQTHGEGCWRTLPKAAGLHRCGKSCRLRWINYL 60 79********************************************97 PP
2	Myb_DNA-binding	51.4	2.5e-16	67	111	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++ ++E++l+++++++lG++ W++I+ +++ gRt++++k++w+++l XP_028110499.1 67 GNFGQDEEDLIIKLHALLGNR-WSLISGRLP-GRTDNEVKNYWNTHL 111 7899***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MRKPCCDKQD TNKGAWTKQE DQKLIDYIQT HGEGCWRTLP KAAGLHRCGK SCRLRWINYL 60 RPDIKHGNFG QDEEDLIIKL HALLGNRWSL ISGRLPGRTD NEVKNYWNTH LKRKLIRVGI 120 DPDNHRLNQT LPRLQNQCMS TLVTSSGSDA ASCLEDDTST SCGLSLDLSI AIPSPSPVLE 180 GEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	1e-74	MYB family protein