PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110762.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 801aa MW: 91207.6 Da PI: 8.0373

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.2	2.1e-21	91	185	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHel 89 +fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr+gCka+++++ + gk++vt++ +HnHel XP_028110762.1 91 DFYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDrvAEKSRAPKALTRVGCKAQFRIRYDAdageGGKYVVTHFIADHNHEL 184 6***************9999.666699999*****99988877899999************987677789************9 PP FAR1 90 a 90 a XP_028110762.1 185 A 185 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
MAPTEVKREG DDYEIPNEAN DIRLMNESRA EPDHGCEAGP SNEEATNMNV EDSGADVKKE 60 MVEYAHRNDM VGNVERAILE QKFDSVEDGE DFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 120 LWLCSREGQR LPKYLDRVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFIADH 180 NHELAEQHCV MYLRSHRSLN SGDKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFIRTD 240 LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDARFFYKYD VCNDNKLQNL FWADSKSRAD 300 YAKFANETIE TYTWVLETFM EAMGNKAPVS VLTDGDKSMR EAIRRVFPDA RHRLCNWHLG 360 KNAVSNVHIS GFAHAFKQCM DMETDETKFE HGWTTMVEEF GLQTNSWVLE TYEKRHMWAE 420 AYMRGHFFAG MKSTQRSECM NAYFNPFLQH KLKLYEFVRH YDRALARIRY NEAGDDAETN 480 NTFPGKLNVK DVFPLPDGQK CYYIHKYRVK DRSWIVTHSP MDAAMRCSCM KFESLGLPCC 540 HMICVMKAEN LTQIPPTCVL HRWTRAVSKD GQQWPQPSID STTTQTARYG ILCSSYNEMC 600 FYASQSTEGF KDARDACLPM TSRMKELYER NLNGGNGDKG KHSFCRQFGV EDPDVVKTKG 660 NPGRASSNCR RPRKCGNCKC IGHTKRTCPK VRFSRTVGTN SDADTPHITD REYNAESLPV 720 RCKTGLVDPS TPHIKQRRLF FDVSPDSKQP VGQYGSVEAA VWKNDSNTID EVNQQRSSNL 780 KLTSSRRKSS NCGIGSNACN G

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

MAPTEVKREG DDYEIPNEAN DIRLMNESRA EPDHGCEAGP SNEEATNMNV EDSGADVKKE  60
MVEYAHRNDM VGNVERAILE QKFDSVEDGE DFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  120
LWLCSREGQR LPKYLDRVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFIADH  180
NHELAEQHCV MYLRSHRSLN SGDKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFIRTD  240
LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDARFFYKYD VCNDNKLQNL FWADSKSRAD  300
YAKFANETIE TYTWVLETFM EAMGNKAPVS VLTDGDKSMR EAIRRVFPDA RHRLCNWHLG  360
KNAVSNVHIS GFAHAFKQCM DMETDETKFE HGWTTMVEEF GLQTNSWVLE TYEKRHMWAE  420
AYMRGHFFAG MKSTQRSECM NAYFNPFLQH KLKLYEFVRH YDRALARIRY NEAGDDAETN  480
NTFPGKLNVK DVFPLPDGQK CYYIHKYRVK DRSWIVTHSP MDAAMRCSCM KFESLGLPCC  540
HMICVMKAEN LTQIPPTCVL HRWTRAVSKD GQQWPQPSID STTTQTARYG ILCSSYNEMC  600
FYASQSTEGF KDARDACLPM TSRMKELYER NLNGGNGDKG KHSFCRQFGV EDPDVVKTKG  660
NPGRASSNCR RPRKCGNCKC IGHTKRTCPK VRFSRTVGTN SDADTPHITD REYNAESLPV  720
RCKTGLVDPS TPHIKQRRLF FDVSPDSKQP VGQYGSVEAA VWKNDSNTID EVNQQRSSNL  780
KLTSSRRKSS NCGIGSNACN G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-73	FAR1 family protein