PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110828.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 180aa    MW: 20725.7 Da    PI: 10.2695
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.53e-182264246
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      ++++eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ 
   XP_028110828.1 22 RAFSEEEEERLLAAHRMYGNK-WAMIARLFP-GRTDNAVKNHWHV 64
                     689******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MGVGKSCRLR WFNQLDPRIN KRAFSEEEEE RLLAAHRMYG NKWAMIARLF PGRTDNAVKN  60
HWHVIMARRH REQNTVYRRR KPSSCSPKGF DGMIMINGYN NHLNNACSES TISSANIDES  120
GSTCTDLSLT PSSTIVRPGF GFVSRLVSPV LQHHQPYGLQ MGMITFYYLK FYVHKILSQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.16e-43MYB family protein