PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028111022.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 826aa MW: 94330.8 Da PI: 7.7836

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028111022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.3	5.2e-23	11	100	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YAk GFs+r+++ +k k+n +++r +vCskeg+r+++ + +e++r++++ tr+gC+a++++k ++ ++k+ev+++ +eHnH++ XP_028111022.1 11 RFYNSYAKVKGFSIRRDQLYKDKNNM-VISRSWVCSKEGYRQSKYLEvEERKREPKQLTRVGCRACFHIKYNRsTSKYEVNEFFKEHNHSM 100 5******************96666.9***********998867888899************999*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 826 aa Download sequence
MTFDSEENGE RFYNSYAKVK GFSIRRDQLY KDKNNMVISR SWVCSKEGYR QSKYLEVEER 60 KREPKQLTRV GCRACFHIKY NRSTSKYEVN EFFKEHNHSM IGPLGIQFLR SHRNVTSADK 120 AQGNAMHHVG MRTSHIMDFA AQQAGGYENV GFIQKDMYNH FGTERRAQVV DGDAEGALAY 180 LCGKEEQDPM FYYKYDVDEE NRLNNLFWTD GGSRTDYLYF GDVLMFDTTY RTNAYNKPFV 240 ILQGVSNHFQ TTVFGCALLA SETVETYIWV LEKFLDAMDH KMPLSVIIDG DKAMCRAIKT 300 VMPTARHRLC KWHLKMNALS NIHIEGFLHS FEKCMSMQCT QEMFELEWKN LVDKYGLHNN 360 KCIADVYCKR TLWAEAYLHG HFFAGAKSTQ RCESMNAFLN RFLKVRLRLF EFVRAYDRAL 420 ARLRHNEAKA QSETENTTPI LSTAMKRIEK HAANIFTRAI FFKFCEQIKS EQVLFMSGKT 480 DIEDIHVYYL SIYTHPESTW NVQYRPSDHA MKCSCLYFES CGIPCSHMVS IMKMEHLKEI 540 PSSYMLQRWT KNVKSSTLLG KTPFPEWVTQ TTRFGALSSA CTEMCYYASH LTNGYEEARD 600 AVTKLTCRMK DLYVQHVEGN GTKGKANVEG TCLHFGVGDP PFTKTKGSCS VANDKFSKPR 660 KCGHCRGTGH TRNKCPKLEN ENIDSFPTQD TYVSGASMLH QEGGFNVDLT FTNSDYNIMG 720 YGSSGHPTFV GTDYNIMGYG SSGHPTFVGT DYNIMGYGSS GHPTFVGTDY NIMGYGSSGH 780 PTFVGTDYNI MGCDSNIYPN FVVRTCSETP DSIYGHVIGE TIDLSK

Sequence ? help Back to Top

Protein Sequence Length: 826 aa Download sequence

MTFDSEENGE RFYNSYAKVK GFSIRRDQLY KDKNNMVISR SWVCSKEGYR QSKYLEVEER  60
KREPKQLTRV GCRACFHIKY NRSTSKYEVN EFFKEHNHSM IGPLGIQFLR SHRNVTSADK  120
AQGNAMHHVG MRTSHIMDFA AQQAGGYENV GFIQKDMYNH FGTERRAQVV DGDAEGALAY  180
LCGKEEQDPM FYYKYDVDEE NRLNNLFWTD GGSRTDYLYF GDVLMFDTTY RTNAYNKPFV  240
ILQGVSNHFQ TTVFGCALLA SETVETYIWV LEKFLDAMDH KMPLSVIIDG DKAMCRAIKT  300
VMPTARHRLC KWHLKMNALS NIHIEGFLHS FEKCMSMQCT QEMFELEWKN LVDKYGLHNN  360
KCIADVYCKR TLWAEAYLHG HFFAGAKSTQ RCESMNAFLN RFLKVRLRLF EFVRAYDRAL  420
ARLRHNEAKA QSETENTTPI LSTAMKRIEK HAANIFTRAI FFKFCEQIKS EQVLFMSGKT  480
DIEDIHVYYL SIYTHPESTW NVQYRPSDHA MKCSCLYFES CGIPCSHMVS IMKMEHLKEI  540
PSSYMLQRWT KNVKSSTLLG KTPFPEWVTQ TTRFGALSSA CTEMCYYASH LTNGYEEARD  600
AVTKLTCRMK DLYVQHVEGN GTKGKANVEG TCLHFGVGDP PFTKTKGSCS VANDKFSKPR  660
KCGHCRGTGH TRNKCPKLEN ENIDSFPTQD TYVSGASMLH QEGGFNVDLT FTNSDYNIMG  720
YGSSGHPTFV GTDYNIMGYG SSGHPTFVGT DYNIMGYGSS GHPTFVGTDY NIMGYGSSGH  780
PTFVGTDYNI MGCDSNIYPN FVVRTCSETP DSIYGHVIGE TIDLSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-110	FAR1 family protein