PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028111336.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 266aa    MW: 28905.8 Da    PI: 7.5979
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028111336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.45.7e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+  l+ +v+++G g W+tI +          R+  ++k++w++
   XP_028111336.1  5 KQKWTSEEEAALKAGVAKYGAGKWSTILKDPEfsaslHSRSNVDLKDKWRN 55
                     79***********************************9************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MGAPKQKWTS EEEAALKAGV AKYGAGKWST ILKDPEFSAS LHSRSNVDLK DKWRNMNVAA  60
NGWGSRHRGS RVALITYQPI SKHDDMPLSI VGQSEVEIVD AKPLSVSSGT SQNDCPKKPI  120
TRLDNLILEA ITNLKEPRGS SRAAIAMYIE VKHQYRIAPT SKHSDVKKDS SPSLLDGKQK  180
NILKVEKNEI KIPTKSQIDA ELEKMKTMTA HEAAAAAAQA VAEAEAAIAE AEEAAREAEQ  240
AEAEAEAAQL FAEEAMKALK CRTVCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-54MYB_related family protein