PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028111638.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 337aa    MW: 36707.8 Da    PI: 6.3169
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028111638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.11.3e-153378148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+++ +E++ +++++++lG++ W++Ia ++  +Rt++++k++w+++l
   XP_028111638.1 33 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLA-KRTDNEIKNYWNTHL 78
                     89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MAMEAGVPCL PKLRCGKSCR LRWTNYLRPD IKRGKFSLQE EQTIIQLHAL LGNRWSAIAT  60
HLAKRTDNEI KNYWNTHLKK KLAKMGIDPL THKPKNEALL SSHGPSKNAA NLSHMAQWES  120
ARLEAEARLV RQSKLRSNSL KLQPQLGSTQ PEFTSASISM NKNVAAQRCL DILNAWNGGG  180
EDLESPKSTM SFLKNAPPIA TTGVGESSAP AEFIEFVGNS GSQFMNEGEE DWKGLGNSMS  240
YTSGIHDVAV EGSAWSPESL RTSGNESVNG IENFVETFTD LLLSNSGDRS FSEGGGESDS  300
GGGGENCSGG SGSDYYEDNK NYWNSILDLV NSSPSHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.14e-84MYB family protein