PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028111639.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 347aa MW: 39691.6 Da PI: 6.5079

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028111639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.1	2.3e-55	9	135	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++ + +i++vd++kvePwdLp ++k +e+ewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ XP_028111639.1 9 LPPGFRFHPTDEELITHYLSQKVLDSSFYA-LAISDVDLNKVEPWDLPWRAKMGEREWYFFCVRDRKYPTGLRTNRATDAGYWKATGKDKEIYR- 101 79***********************988.67***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++lvg+kktLvfykgrapkgek++Wvmheyrle XP_028111639.1 102 VKTLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 135 8899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MEKELELELP PGFRFHPTDE ELITHYLSQK VLDSSFYALA ISDVDLNKVE PWDLPWRAKM 60 GEREWYFFCV RDRKYPTGLR TNRATDAGYW KATGKDKEIY RVKTLVGMKK TLVFYKGRAP 120 KGEKSNWVMH EYRLEGKYSP YSMPKTAKNE WVISRVFHKS SSGKKIHISG LTRMSSYGEK 180 SQPSNLPPLL DCSAHDDRTR STAADTSHVF CFSDLTEHKK SESGIVDSFN NPFLPSFCSA 240 SKPSTVSLLC SKASVSDTLC STQFLPNLEN FEYPDCGLIQ DQSIFRFLVQ NNEQNRHFNA 300 EFSPDAGTST DMSSVVSYHE MGQRCYEDQD DPITSTGPVD LDCLWNY

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MEKELELELP PGFRFHPTDE ELITHYLSQK VLDSSFYALA ISDVDLNKVE PWDLPWRAKM  60
GEREWYFFCV RDRKYPTGLR TNRATDAGYW KATGKDKEIY RVKTLVGMKK TLVFYKGRAP  120
KGEKSNWVMH EYRLEGKYSP YSMPKTAKNE WVISRVFHKS SSGKKIHISG LTRMSSYGEK  180
SQPSNLPPLL DCSAHDDRTR STAADTSHVF CFSDLTEHKK SESGIVDSFN NPFLPSFCSA  240
SKPSTVSLLC SKASVSDTLC STQFLPNLEN FEYPDCGLIQ DQSIFRFLVQ NNEQNRHFNA  300
EFSPDAGTST DMSSVVSYHE MGQRCYEDQD DPITSTGPVD LDCLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-124	NAC family protein