PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028111678.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 464aa MW: 51836 Da PI: 6.5058

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028111678.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.1	1.2e-51	11	141	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +ppGfrFhPt+eel+++yL+kkv+ kk++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk XP_028111678.1 11 VPPGFRFHPTEEELLHYYLRKKVAYKKIDL-DVIRDVDLNKLEPWDIQEKCKIgsstPQSDWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKV 104 69**************************.9***********96433322224559****************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++s + + +g++ktLvfykgrap+g+k+dW+mheyrle XP_028111678.1 105 IYS-SLRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLE 141 .8999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MNLSVNGQSQ VPPGFRFHPT EEELLHYYLR KKVAYKKIDL DVIRDVDLNK LEPWDIQEKC 60 KIGSSTPQSD WYFFSHKDKK YPTGTRTNRA TTAGFWKATG RDKVIYSSLR RIGMRKTLVF 120 YKGRAPHGQK SDWIMHEYRL ELDDTFTTHH DADKANNLAA AAGGGGGGDY SVSEEGWVVC 180 RVFKKKNYHR ALEIESPQRQ RQSPSTSSMN MDHSRNQLMV MRNSSNDGGI ADQILEYMGR 240 SCKQEENETT TTTSNNSNIN MPSSSLINII NTVHLPSLEE SDTPTILPSS SSSSSLNNKY 300 CYSSPSFFNH HHEEEGCTTT TTTTAAAAAA FKDYGGGGQS MDPLNHHHQK DGIINDWAAF 360 DRLVASQLNG PGSEQDAKDD TSNHLSSCYN YGYRYGDPNV DFCFSIDGHD HDDVVQLSQL 420 PSSSRPNIQS SSSQVQSTEI DLWSFTRSLS SSSSCSDPLC HLSV

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MNLSVNGQSQ VPPGFRFHPT EEELLHYYLR KKVAYKKIDL DVIRDVDLNK LEPWDIQEKC  60
KIGSSTPQSD WYFFSHKDKK YPTGTRTNRA TTAGFWKATG RDKVIYSSLR RIGMRKTLVF  120
YKGRAPHGQK SDWIMHEYRL ELDDTFTTHH DADKANNLAA AAGGGGGGDY SVSEEGWVVC  180
RVFKKKNYHR ALEIESPQRQ RQSPSTSSMN MDHSRNQLMV MRNSSNDGGI ADQILEYMGR  240
SCKQEENETT TTTSNNSNIN MPSSSLINII NTVHLPSLEE SDTPTILPSS SSSSSLNNKY  300
CYSSPSFFNH HHEEEGCTTT TTTTAAAAAA FKDYGGGGQS MDPLNHHHQK DGIINDWAAF  360
DRLVASQLNG PGSEQDAKDD TSNHLSSCYN YGYRYGDPNV DFCFSIDGHD HDDVVQLSQL  420
PSSSRPNIQS SSSQVQSTEI DLWSFTRSLS SSSSCSDPLC HLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	9e-90	NAC family protein