PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028111684.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 324aa    MW: 35131.8 Da    PI: 8.9348
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028111684.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.42.9e-1291135347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+  ++ + ++lG+g+W+ ++r     Rt+ q+ s+ qky
   XP_028111684.1  91 PWTEDEHRAFLAGLEKLGKGDWRGVSRIYVPSRTPTQVASHAQKY 135
                      8**************************8888*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MVKESVRKCS HCGHNGHNSR TCNGNGKGCL KLFGVTILTQ KEDESIRKSK STGNLIACNG  60
EHSVLDVGYL SDGLIHSKRA NDAHERKKGV PWTEDEHRAF LAGLEKLGKG DWRGVSRIYV  120
PSRTPTQVAS HAQKYFIRMS TADKKKRRSS LFDMSFNEPQ IYHSPSQEPL DKTAEISPQA  180
DKLPAANLNN IGDTQGQAST SALVASPLEA PPVLPLAASY GVPDFRQMPY MPMVGVSGNV  240
QNFPGGTLYP TMSLVPMVNF PNHHGYFYVP KSYGNFATCG PYMAQPSSGL LAQPLTHGLL  300
SQAGSAETSS MVNKDGLDMH VGVN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144148KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.17e-68MYB_related family protein