PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028111742.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 249aa    MW: 27533 Da    PI: 7.5704
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028111742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20116166255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  XP_028111742.1 116 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAALAYDRAAYRMRG 166
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MYSHDCAPAS FQATHSGDLP LYRRSSSFSS LIPCLTETWG DLPLKVDDSE DMVIYGFLRD  60
AVNVGWTPFN LTVTDVKSEF EPRDEPEPAT TTTSLAAAQL VAPPLEAAVV PRKGKHYRGV  120
RQRPWGKFAA EIRDPAKNGA RVWLGTYETA EEAALAYDRA AYRMRGSRAL LNFPHRIGSD  180
EPEPVRITAK RRSAEPSASG SSESGSPKRR KKGLTAPEQA ELEMESQSNV FEVRNKMRPL  240
PVGEQLLVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190212KRRSAEPSASGSSESGSPKRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.19e-56ERF family protein