PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028111757.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 160aa MW: 18481.3 Da PI: 9.0475

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028111757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.2	1.9e-13	13	56	5	48
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T +Ede+l+ + +G g+W+++++ g+ R++k+c++rw +yl XP_028111757.1 13 THQEDEKLITHISSHGHGCWSSVPKLAGLQRCEKSCRLRWINYL 56 789***************************************97 PP
2	Myb_DNA-binding	55.1	1.7e-17	62	105	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E+ +++d+++ lG++ W+ Ia++++ gRt++++k++w++ XP_028111757.1 62 RGSFTEQEERIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 105 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
NTNKNLHVQF SKTHQEDEKL ITHISSHGHG CWSSVPKLAG LQRCEKSCRL RWINYLRPDL 60 KRGSFTEQEE RIIIDVHRIL GNRWAQIAKH LPGRTDNEVK NFWNSCIKKK LISLGLDPNT 120 HNLLSPHQTT TNLFWCCFQC LAPNGLFSPF CLTICSLIFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	2e-68	MYB family protein