PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028111794.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NF-YB

Protein Properties

Length: 142aa MW: 15637 Da PI: 4.9352

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028111794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	79.2	5.7e-25	56	102	2	48
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvts 48 reqdrflPianvsrimkk+lP nakiskdaketvqec+sefis++t+ XP_028111794.1 56 REQDRFLPIANVSRIMKKALPVNAKISKDAKETVQECISEFISLITG 102 89*******************************************97 PP
2	NF-YB	46.1	1.2e-14	100	134	62	96
NF-YB 62 ingddllwalatlGfedyveplkvylkkyrelege 96 i+gddllwa++tlGfe+yveplk+yl ++r++ege XP_028111794.1 100 ITGDDLLWAMTTLGFEEYVEPLKLYLLRFRDMEGE 134 89*******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGVSECGISK VPHPIPTSKL THLTPLSPPQ PPPPPPPPES DPSGGHNNSN SELSPREQDR 60 FLPIANVSRI MKKALPVNAK ISKDAKETVQ ECISEFISLI TGDDLLWAMT TLGFEEYVEP 120 LKLYLLRFRD MEGEICCVLF GN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	3e-47	NF-YB family protein