PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028111808.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NF-YB

Protein Properties

Length: 215aa MW: 24624.2 Da PI: 7.3443

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028111808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	179.2	3.6e-56	44	139	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrkting+d++wa++tlGfedyv+plk+yl+kyrelege XP_028111808.1 44 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGEDIIWAITTLGFEDYVNPLKQYLAKYRELEGE 138 89*******************************************************************************************99 PP NF-YB 97 k 97 k XP_028111808.1 139 K 139 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MEDDRNKNGP HVGNTGSPES SCSKSSNNKN HNHNNNININ NNNKEQDRFL PIANVGRIMK 60 KVIPGNGKIS KDAKETVQEC VSEFISFVTG EASDKCQREK RKTINGEDII WAITTLGFED 120 YVNPLKQYLA KYRELEGEKL HLPKQQQQQQ QRSEQGLQHH EHEQNMPYTS VYSSTSLISQ 180 PSFVATDQPF LQPYHPTSIQ KQLHQQEHID SVGRW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G13570.1	1e-66	NF-YB family protein