PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028111819.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ARR-B
Protein Properties Length: 252aa    MW: 28327.6 Da    PI: 5.0676
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028111819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like80.61.8e-25202251151
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                     kpr++WtpeLH++Fv av+q+ G ++A+Pk+ile+m+v gLt+e+v+SHLQ
  XP_028111819.1 202 KPRMVWTPELHQQFVAAVNQI-GLKNAVPKKILEVMNVSGLTRENVASHLQ 251
                     79*******************.9**************************** PP
2Myb_DNA-binding38.72.3e-12204251145
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 
                      r+ WT+e+++++v av+q G +   +k+I + m+  g+t++++ s++q
   XP_028111819.1 204 RMVWTPELHQQFVAAVNQIGLKnaVPKKILEVMNvSGLTRENVASHLQ 251
                      789*******************9************************9 PP
3Response_reg77.83.9e-26231291107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+ + +++l+++l+  +y ev++++++++al +l++ +  +D+++ D+ mp+mdG++ll+ i  e  +lp+++++a +e++ + + +  G
  XP_028111819.1  23 VLAVDDDCTCLQILAKMLQTCRY-EVTTCSSAQDALSILRQGKskFDIVISDVHMPDMDGFKLLEIICLEM-DLPVVMMSADDENDVVMKGIIDG 115
                     799********************.***************888888**********************8865.9********************** PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                     a d+l+Kp+ +e++
  XP_028111819.1 116 ACDYLVKPVRMEAI 129
                     ********999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MSVTKEKHST CTTNLEFPAG LRVLAVDDDC TCLQILAKML QTCRYEVTTC SSAQDALSIL  60
RQGKSKFDIV ISDVHMPDMD GFKLLEIICL EMDLPVVMMS ADDENDVVMK GIIDGACDYL  120
VKPVRMEAIK YLWKHVVRKQ KYGLKAIEQS KNEDNDEIMN QKQLNAESHI TSMDTKNCGS  180
SNCEKDEEEE GKDKDDSVSL KKPRMVWTPE LHQQFVAAVN QIGLKNAVPK KILEVMNVSG  240
LTRENVASHL QV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.16e-89ARR-B family protein