PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028112021.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 455aa MW: 51360.9 Da PI: 5.8761

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028112021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	63.8	3.3e-20	221	274	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl Wt LH++Fv+av+ L G +kA+Pk+il++m+ + ++l+ v+SHL YR XP_028112021.1 221 KKRLIWTRVLHNKFVDAVRLL-GVDKAVPKKILQIMNEPVISLKSVASHLYWYRN 274 68*****************.*****************************96 PP
2	Myb_DNA-binding	23	1.9e-07	223	272	1	47
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 r+ WT ++ ++vdav++lG + +k+I + m+ +lk++ s+++ y XP_028112021.1 223 RLIWTRVLHNKFVDAVRLLGVDkaVPKKILQIMNePVISLKSVASHLYWY 272 667******************************88999****9865 PP
3	Response_reg	70	1e-23	30	138	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++++ +l+k +y +v+++++++eal++l++++ +D++++D+ +m+G+ell+ i e ++p+i+++a++++e + + + G XP_028112021.1 30 VLVVDDNVVCLKIVAALLNKCRY-KVTATTKATEALQMLRKNKesYDIVITDVIRLDMTGFELLEIIGLEM-DMPVIMMSANDDKESVMKGVMHG 122 89*******************.***********888889****************996644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 ++d+l Kp+ ee+ + XP_028112021.1 123 VRDYLIKPVRLEEVKN 138 *******9999765 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MSKIDVRVSL NRAAPPQSRV NANFPEGLRV LVVDDNVVCL KIVAALLNKC RYKVTATTKA 60 TEALQMLRKN KESYDIVITD VIRLDMTGFE LLEIIGLEMD MPVIMMSAND DKESVMKGVM 120 HGVRDYLIKP VRLEEVKNIW QHVVRNNLFN TMKSGTMQTG TDQNPPIPSS KRQREKSNEE 180 EEEEEEEEEE EEEEEEEEEE EDDDETNTHS NEESSAQKKK KKRLIWTRVL HNKFVDAVRL 240 LGVDKAVPKK ILQIMNEPVI SLKSVASHLY WYRNALRKEN TKANISQESE DNINSNRTNG 300 LLSDTITTSC VNQGLNTINH HNRFAEQYIS TGITSFGSRL QTFGASTSNA KLFQQNQLPP 360 KVVADQKCPT ALGSVPPSPF FAANPSPHHE LNGMRFHSIN SKAKMFDDNV KMSSQLPSFN 420 TGQSGPSSMP VGFGPYSSFS NAWSRFKSIE SNFLT

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MSKIDVRVSL NRAAPPQSRV NANFPEGLRV LVVDDNVVCL KIVAALLNKC RYKVTATTKA  60
TEALQMLRKN KESYDIVITD VIRLDMTGFE LLEIIGLEMD MPVIMMSAND DKESVMKGVM  120
HGVRDYLIKP VRLEEVKNIW QHVVRNNLFN TMKSGTMQTG TDQNPPIPSS KRQREKSNEE  180
EEEEEEEEEE EEEEEEEEEE EDDDETNTHS NEESSAQKKK KKRLIWTRVL HNKFVDAVRL  240
LGVDKAVPKK ILQIMNEPVI SLKSVASHLY WYRNALRKEN TKANISQESE DNINSNRTNG  300
LLSDTITTSC VNQGLNTINH HNRFAEQYIS TGITSFGSRL QTFGASTSNA KLFQQNQLPP  360
KVVADQKCPT ALGSVPPSPF FAANPSPHHE LNGMRFHSIN SKAKMFDDNV KMSSQLPSFN  420
TGQSGPSSMP VGFGPYSSFS NAWSRFKSIE SNFLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	1e-65	ARR-B family protein