PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028112185.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 96aa    MW: 11489.3 Da    PI: 9.8111
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028112185.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81.1e-073169444
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     +T++E++l+ +  k+ G + W +Ia +++ gR ++++  +w
   XP_028112185.1 31 MTEQEEDLICRMYKLVGER-WGLIAGRIP-GRKAEEIERFW 69
                     7******************.*********.********999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MDKRRRKQLK TSHHCCGSEE VSSIEWEFIN MTEQEEDLIC RMYKLVGERW GLIAGRIPGR  60
KAEEIERFWV MRHSEGFAHR RKELLLKNKK SLNISS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
128DKRRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.12e-38MYB_related family protein