PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028112214.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 186aa    MW: 21777.8 Da    PI: 9.4223
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028112214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.12e-24231531128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdke 91 
                     lp G+rF+Pt+eel+++yL +kv +++l+ + +  i+ ++ y+  P++L  +  ++ ++w f ++ d+    ++++ r +    g+W++ g + +
  XP_028112214.1  23 LPIGYRFSPTQEELMTHYLINKVLNTPLPSQIMmeIDAIEFYSKPPNNLV-SNPTNGRDWCFLIQYDEYFYGERKQIREVGngIGFWRSIGIEDP 116
                     699************************6664433589999*********7.44467899*99999888666666667765523688********* PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++++g     k  + +++g+ pk++kt+W m+++r+
  XP_028112214.1 117 IYNSNGDIYAFKINFSYFSGSIPKAKKTHWRMEQFRI 153
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MDTTIQGIIT QKQVKEKSIV TQLPIGYRFS PTQEELMTHY LINKVLNTPL PSQIMMEIDA  60
IEFYSKPPNN LVSNPTNGRD WCFLIQYDEY FYGERKQIRE VGNGIGFWRS IGIEDPIYNS  120
NGDIYAFKIN FSYFSGSIPK AKKTHWRMEQ FRIHFNCDTK TLKGNEWVLG RLKRGQDYSK  180
PRSKSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.26e-20NAC family protein