PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028112290.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 189aa    MW: 21256.6 Da    PI: 9.0923
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028112290.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP135.31.8e-4261138178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cq+e+C++dl++ak+yhrrhkvCe+h+ka+vv+v+g++qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++
  XP_028112290.1  61 ICQAENCTTDLADAKQYHRRHKVCEHHAKAQVVMVAGIRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKNTS 138
                     5**************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEFGKQRGGM NMMKDKVKME AAADGDDFDK DDNNDDFVNA SKDDKKKRAS GGGGGGSSMR  60
ICQAENCTTD LADAKQYHRR HKVCEHHAKA QVVMVAGIRQ RFCQQCSRFH ELSEFDEAKR  120
SCRRRLAGHN ERRRKNTSDS HAEGSSHKGT GTGIGTHQLN ETVSGQVDER GRIQISMQEN  180
ATYKHFHIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15270.14e-46SBP family protein