PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028112291.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 173aa    MW: 19264.3 Da    PI: 9.3372
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028112291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP72.29.4e-2361108148
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 
                     +Cq+e+C++dl++ak+yhrrhkvCe+h+ka+vv+v+g++qrfCqqCsr
  XP_028112291.1  61 ICQAENCTTDLADAKQYHRRHKVCEHHAKAQVVMVAGIRQRFCQQCSR 108
                     5**********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MEFGKQRGGM NMMKDKVKME AAADGDDFDK DDNNDDFVNA SKDDKKKRAS GGGGGGSSMR  60
ICQAENCTTD LADAKQYHRR HKVCEHHAKA QVVMVAGIRQ RFCQQCSRRL AGHNERRRKN  120
TSDSHAEGSS HKGTGTGIGT HQLNETVSGQ VDERGRIQIS MQENATYKHF HIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.14e-30SBP family protein