PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028112381.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 212aa    MW: 23477.6 Da    PI: 8.0346
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028112381.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-20108158255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp++ng  +r++lg+f tae+Aa a+++a+ +++g
  XP_028112381.1 108 HYRGVRQRP-WGKFAAEIRDPTKNG--ARVWLGTFETAEDAAVAYDRAAYRMRG 158
                     8********.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MMMCTQNDFD ADFALLESIS RQLLSNDSES NSWNSLFTCL GDNWGELPLK ENDSEDMLVY  60
GLLNEAATVG WLPSLTAATT TSATVKLEPQ ICNFGSPPLP VVPSKGKHYR GVRQRPWGKF  120
AAEIRDPTKN GARVWLGTFE TAEDAAVAYD RAAYRMRGSR ALLNFPLRIN SGEPEPVRVT  180
SKRSAVATAE SRSPKRRRKV VETAVIEPKV EV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1194200PKRRRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.11e-61ERF family protein