PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028112541.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 235aa MW: 26611.1 Da PI: 9.5994

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028112541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.4	2.6e-32	158	216	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++ +prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ XP_028112541.1 158 LDDGYKWRKYGQKVVKNTLHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHS 216 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MLNQGLFEDQ EMSTQMGFFS FAPNMSMPPI HGSGCHHQSL KTLTTIPSSP TLAAADVPSS 60 NPSETLLSSS ATSKQRQDFT THLGGPQLSL QRSSANLWAW GEVNECMSYK RSGSGGDDHL 120 GISAVNMKMK MKMKKIKGRR KVREPRFCFK TMSDVDVLDD GYKWRKYGQK VVKNTLHPRS 180 YYRCTQDNCR VKKRVERLAE DPRMVITTYE GRHAHSPSHD EDDAQAPSQL NNFFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	8e-55	WRKY family protein