PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028112682.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 224aa MW: 26003.5 Da PI: 8.6471

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028112682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.4	1.2e-23	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++ Fs+r++ +k+k +++ ++r +vC+keg+ + +k++ ++++raetrtgC+a+l vk+++ gk++vt+++++HnH+l+ XP_028112682.1 25 DFYNTYGGRIRFSIRRDFCRKNKFTNQLICRLLVCNKEGFWKVDKRD-PLTKNSRAETRTGCEARLYVKLDEgIGKFVVTDFKEKHNHDLV 114 6****************************************9999.999*****************99*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MEPENDCAWK PKHGMTFDSE QSVYDFYNTY GGRIRFSIRR DFCRKNKFTN QLICRLLVCN 60 KEGFWKVDKR DPLTKNSRAE TRTGCEARLY VKLDEGIGKF VVTDFKEKHN HDLVSPECAH 120 MLPSQRKIST TQGIELDLAA QSGLRLGQSF ELMGKEAGGR QCLGFTKLDQ KNYLRTKRKQ 180 SLAYGEVGNV LQYFKEKSLQ DPSFFYAFQL DNEEQITNMF WADA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-38	FAR1 family protein