PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028112770.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 787aa MW: 90062.7 Da PI: 8.0564

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028112770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.7	1.3e-25	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GF++r+++ kk+k +++i++r++vC+keg+r+ +k++ ++++raetrtgC+a+l vk++ +gk+ v++++++HnHel+ XP_028112770.1 25 DFYNAYGGRMGFNIRREYCKKNKLTKKIISRNLVCNKEGFRKVDKRD-PLTKTPRAETRTGCEARLFVKLDVnSGKFAVIDFKENHNHELV 114 6*****************************************999.9999***************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
MEPDNDCGWK PKVGMTFDSE ESAHDFYNAY GGRMGFNIRR EYCKKNKLTK KIISRNLVCN 60 KEGFRKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF AVIDFKENHN HELVSLDCAH 120 MLPSQRKISD TQAIELDLAS ESGLRLGQSF ELMGREAGGR QSLVTFDTTY KLNKEHRPFA 180 SFVGFNHHRE TVVFGATLLY DETAETFVWL FQTFLEAMSK KAPKTLFTDQ DAAMAKAIPI 240 VMPDTSHRLC TWHLMQNALR HGNCLFQDKG VKGVLNRFMF DIEDENEWEM KWGEMLDTYD 300 AHDNHWLKLI FGVKEKWGWP YVRSTWAARM STTQLSESFN AFLKEYIRSD FNLNEFFMHF 360 ERVLCEKRYK ELEAGYALCQ RLPRMRAPFL MLSQMGNVYT KNIFEEFQDE YFLSVELDIQ 420 AIEYIDGCSL YTVVDAIGKN ARKVKMEMDG SLTCSCSKFE RKGILCSHCL KVMREILKLK 480 EIPSQYIMKR WTKQTRGEAV TDKLGNEIQV DVKFKQASWY KTLMTAFRSI ACRAAETEES 540 YDFCCSQVAA LGAHVESKIS AHFCPQKEVS INDQPQTCEQ EDNNHEDNNH VVQIPIGMKK 600 KHPTSKGKRR IKGPCELALQ ASFKKKSCAQ FLSSSRLVAA PTVRPSPLSI GGDVSIHENV 660 TPLHPSLAPP PPPHSVAMGG TIPPQLIYPT YNANNLAYCG QPTFMTLFQG GYDIGFEDSQ 720 GSQTGSRPTN NLLLHTEVLL LLIWVWMAMK RWKALQISCI GDASELLYLT LMLMLKLKYL 780 IVKLVEW

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

MEPDNDCGWK PKVGMTFDSE ESAHDFYNAY GGRMGFNIRR EYCKKNKLTK KIISRNLVCN  60
KEGFRKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF AVIDFKENHN HELVSLDCAH  120
MLPSQRKISD TQAIELDLAS ESGLRLGQSF ELMGREAGGR QSLVTFDTTY KLNKEHRPFA  180
SFVGFNHHRE TVVFGATLLY DETAETFVWL FQTFLEAMSK KAPKTLFTDQ DAAMAKAIPI  240
VMPDTSHRLC TWHLMQNALR HGNCLFQDKG VKGVLNRFMF DIEDENEWEM KWGEMLDTYD  300
AHDNHWLKLI FGVKEKWGWP YVRSTWAARM STTQLSESFN AFLKEYIRSD FNLNEFFMHF  360
ERVLCEKRYK ELEAGYALCQ RLPRMRAPFL MLSQMGNVYT KNIFEEFQDE YFLSVELDIQ  420
AIEYIDGCSL YTVVDAIGKN ARKVKMEMDG SLTCSCSKFE RKGILCSHCL KVMREILKLK  480
EIPSQYIMKR WTKQTRGEAV TDKLGNEIQV DVKFKQASWY KTLMTAFRSI ACRAAETEES  540
YDFCCSQVAA LGAHVESKIS AHFCPQKEVS INDQPQTCEQ EDNNHEDNNH VVQIPIGMKK  600
KHPTSKGKRR IKGPCELALQ ASFKKKSCAQ FLSSSRLVAA PTVRPSPLSI GGDVSIHENV  660
TPLHPSLAPP PPPHSVAMGG TIPPQLIYPT YNANNLAYCG QPTFMTLFQG GYDIGFEDSQ  720
GSQTGSRPTN NLLLHTEVLL LLIWVWMAMK RWKALQISCI GDASELLYLT LMLMLKLKYL  780
IVKLVEW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-70	FAR1 family protein