PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028112895.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 689aa MW: 78709.9 Da PI: 8.8975

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028112895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.3	9.3e-22	31	125	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHel 89 +fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr+gCka+++++ + gk++vt+++ +HnHel XP_028112895.1 31 DFYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDrvAEKSRAPKALTRVGCKAQFRIRYDAdageGGKYVVTHFVADHNHEL 124 6***************9999.666699999*****99988877899999************987677789************9 PP FAR1 90 a 90 a XP_028112895.1 125 A 125 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MVDDAHRNDM VGDVERAILA QKFDSVEDGE DFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 60 LWLCSREGQR LPKYLDRVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFVADH 120 NHELAEQHCV MYLRSHRSLN SDDKAQAMTM RNVGVKTSQI MDYMVNQSGS YENVGFIRTD 180 LHNHIQAERR AEVEDANETI ETYTWVLETF MEAMGNKAPV SVLTDGDKSM REAIRRVFPD 240 ARHRLCNWHL GKNAVSNVHI SGFAHAFKQC MDMETDETKF EHGWTTMVEK FGLQTNSWVL 300 ETYEKRHMWA EAYMRGHFFA GMKSTQRSEC MNAYFNPFLQ HKLKLYEFVR HYDRALARIR 360 YNEAGDDAET NNTFPGKLNV KDVFPLPDGQ KCYYIHKYRV KDRSWIVTHS PMDAAMRCSC 420 MKFESLGLPC CHMICVMKAE NLTQIPPTCV LHRWTRAASK DGQQWPQPSI DSTTTQTARY 480 GILCSSYNEM CFYASQSTEG FKDARDACLP MTTRMKELYE RNLNGGNGDK GKHSFRRQFG 540 VEDPDVVKTK GNPGRASSNC RRPRKCGNCK CIGHTKRTCP KVRFSRTVGN NSDADTPHIT 600 DREYNAESLP VRCKTGLVDP STPHIKQRRL FFDVSPDSKQ PVGQYGSVEA AVWKNDSNTI 660 DEVNQQRSSN LKLTSSRRKS SNCGIGSNA

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MVDDAHRNDM VGDVERAILA QKFDSVEDGE DFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  60
LWLCSREGQR LPKYLDRVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFVADH  120
NHELAEQHCV MYLRSHRSLN SDDKAQAMTM RNVGVKTSQI MDYMVNQSGS YENVGFIRTD  180
LHNHIQAERR AEVEDANETI ETYTWVLETF MEAMGNKAPV SVLTDGDKSM REAIRRVFPD  240
ARHRLCNWHL GKNAVSNVHI SGFAHAFKQC MDMETDETKF EHGWTTMVEK FGLQTNSWVL  300
ETYEKRHMWA EAYMRGHFFA GMKSTQRSEC MNAYFNPFLQ HKLKLYEFVR HYDRALARIR  360
YNEAGDDAET NNTFPGKLNV KDVFPLPDGQ KCYYIHKYRV KDRSWIVTHS PMDAAMRCSC  420
MKFESLGLPC CHMICVMKAE NLTQIPPTCV LHRWTRAASK DGQQWPQPSI DSTTTQTARY  480
GILCSSYNEM CFYASQSTEG FKDARDACLP MTTRMKELYE RNLNGGNGDK GKHSFRRQFG  540
VEDPDVVKTK GNPGRASSNC RRPRKCGNCK CIGHTKRTCP KVRFSRTVGN NSDADTPHIT  600
DREYNAESLP VRCKTGLVDP STPHIKQRRL FFDVSPDSKQ PVGQYGSVEA AVWKNDSNTI  660
DEVNQQRSSN LKLTSSRRKS SNCGIGSNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-42	FAR1 family protein