PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113197.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 182aa MW: 21169 Da PI: 7.9987

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	6.1e-18	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl XP_028113197.1 13 KGPWTPEEDQILISYIQSYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 60 79****************************99**********97 PP
2	Myb_DNA-binding	56.6	5.9e-18	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e ++++++ G++ W+tIa++++ gRt++++k++w+++l XP_028113197.1 66 RGNFTREEEETIIKLHQIIGNR-WSTIASRLP-GRTDNEIKNFWHTHL 111 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MRVPCCEEMG MKKGPWTPEE DQILISYIQS YGHGNWRALP KQAGLLRCGK SCRLRWTNYL 60 RPDIKRGNFT REEEETIIKL HQIIGNRWST IASRLPGRTD NEIKNFWHTH LKKRLKQSHH 120 MVIESLTYAP ISTQFSEFIS SSESDSPLEK VTGPANEEEY TINANVNDDM AFWHNLFMKA 180 GE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	117	LKKRLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	8e-73	MYB family protein