PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113215.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 485aa MW: 54179 Da PI: 5.1254

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	5.1e-13	284	330	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + E++RR+ +N++f Lr+l+P++ +K + a+++ A++YIk+L XP_028113215.1 284 TKHFATEKQRREYLNDRFKALRSLVPNP-----TKSDRASVVGDAIDYIKEL 330 68************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MYEESACFDP NITMQDGLAE DGFPQNVPNY TPSFSMEDLS YHQNPPPEEA ARAAAMEVEL 60 QQQMGLDMEH CYNNNNNINN NFIDTHLMQE VVHDSNQVLQ YDQSNWDNSV NHEIQEMSFH 120 NPPHQHQSFN NSSSLTDNPY PPTPDLLNLF HLPRCSLPNS SLSFMNPTQK SANFQASLGF 180 LGDLPSATDT ASAASSVMYD PLFHLNLPAQ PPLFRELFQS LPHGYNLGGS RTGSLFGGGG 240 VDEREGSGGV YQDAEGRHFD SGVLEFNGDM NFKASRGSNG KGTTKHFATE KQRREYLNDR 300 FKALRSLVPN PTKSDRASVV GDAIDYIKEL LRTVNELKIL VEKKRCGRER SKRHKKDDGS 360 ATGDVERSNM KPDPEQSYNG STLRSSWLQR KSKDTEVDVR IIDDEVTIKL AQRKKINCLL 420 LVSKVIDELQ LDIQHVAGGL VGDNYSYLFN SKICEGSSVY ASAIANKLIE VVNRQDAEIP 480 PTSSY

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MYEESACFDP NITMQDGLAE DGFPQNVPNY TPSFSMEDLS YHQNPPPEEA ARAAAMEVEL  60
QQQMGLDMEH CYNNNNNINN NFIDTHLMQE VVHDSNQVLQ YDQSNWDNSV NHEIQEMSFH  120
NPPHQHQSFN NSSSLTDNPY PPTPDLLNLF HLPRCSLPNS SLSFMNPTQK SANFQASLGF  180
LGDLPSATDT ASAASSVMYD PLFHLNLPAQ PPLFRELFQS LPHGYNLGGS RTGSLFGGGG  240
VDEREGSGGV YQDAEGRHFD SGVLEFNGDM NFKASRGSNG KGTTKHFATE KQRREYLNDR  300
FKALRSLVPN PTKSDRASVV GDAIDYIKEL LRTVNELKIL VEKKRCGRER SKRHKKDDGS  360
ATGDVERSNM KPDPEQSYNG STLRSSWLQR KSKDTEVDVR IIDDEVTIKL AQRKKINCLL  420
LVSKVIDELQ LDIQHVAGGL VGDNYSYLFN SKICEGSSVY ASAIANKLIE VVNRQDAEIP  480
PTSSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31220.1	1e-89	bHLH family protein