PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113432.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 391aa MW: 45148.9 Da PI: 6.3919

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113432.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	135.3	4.1e-42	37	184	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......................kvka..eekewyfFskrdkkyatg 71 lppG+rF+Ptd l+v+yLk+k+++++l++ + i++v++y+++P+ L + eekewyfF++rd+ky++g XP_028113432.1 37 LPPGYRFNPTDAVLIVNYLKRKINHQTLPI-NKIHDVHLYEFNPQYLSGipvlqyvscssirihiswicenY--KpyEEKEWYFFTPRDRKYKNG 128 79**************************.78**********8557899999999998888876542..145889*********** PP NAM 72 krknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 kr+nra+ +gyWk tg++k+v g++vg ++ Lvfykg pkgekt+W+mheyrl XP_028113432.1 129 KRPNRAAGDGYWKVTGTNKTVRF-MGADVGFRTALVFYKGIPPKGEKTNWIMHEYRL 184 *****************99.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEDQQYQPIE EQQAQASVST LANNVDHVDV DEYFASLPPG YRFNPTDAVL IVNYLKRKIN 60 HQTLPINKIH DVHLYEFNPQ YLSGIPVLQY VSCSSIRIHI SWICENYKPY EEKEWYFFTP 120 RDRKYKNGKR PNRAAGDGYW KVTGTNKTVR FMGADVGFRT ALVFYKGIPP KGEKTNWIMH 180 EYRLPNNHPQ APTVGNEMRL DDCVLCKIYK NVDRSRSIRN RYPDDEEVVP AEHYYNEHLP 240 AENSAMLPSL ESLIPGEAME MDSGYNGKVN PNAFINSHFL QSPQLHFNHD QVMMANSTYF 300 NYPYDVNKPP IQPAMQLTLN QPQSIDGMKS NMRPKSMNQN LHCWALEPRG LDEELKGSMF 360 QSDAHIDEWF PGLENGVPSC CRMPSQTGDI K

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEDQQYQPIE EQQAQASVST LANNVDHVDV DEYFASLPPG YRFNPTDAVL IVNYLKRKIN  60
HQTLPINKIH DVHLYEFNPQ YLSGIPVLQY VSCSSIRIHI SWICENYKPY EEKEWYFFTP  120
RDRKYKNGKR PNRAAGDGYW KVTGTNKTVR FMGADVGFRT ALVFYKGIPP KGEKTNWIMH  180
EYRLPNNHPQ APTVGNEMRL DDCVLCKIYK NVDRSRSIRN RYPDDEEVVP AEHYYNEHLP  240
AENSAMLPSL ESLIPGEAME MDSGYNGKVN PNAFINSHFL QSPQLHFNHD QVMMANSTYF  300
NYPYDVNKPP IQPAMQLTLN QPQSIDGMKS NMRPKSMNQN LHCWALEPRG LDEELKGSMF  360
QSDAHIDEWF PGLENGVPSC CRMPSQTGDI K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-51	NAC family protein