PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028113434.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 256aa    MW: 29693.6 Da    PI: 7.5328
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028113434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR157.16.1e-1831101172
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                     +fYn+Y+ +vGFs+rk++ +k+k+++e+t+rtfvC+keg+r  +k++    + +r+e r+gC a++ ++k +
  XP_028113434.1  31 DFYNTYGGKVGFSIRKAYAHKNKQTKETTSRTFVCYKEGTRGIDKRD-PLVKFSRQEVRCGCGARFSIRKIS 101
                     6*******************************************999.88899***************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MEENNVVDEL ANCGWKPKLG MPFDSEQAAY DFYNTYGGKV GFSIRKAYAH KNKQTKETTS  60
RTFVCYKEGT RGIDKRDPLV KFSRQEVRCG CGARFSIRKI STIQAIEVEL ASESGIPLKA  120
AYELFDRESG GRASLGFTKL DQKNYLRSKR QKDLEYRETG SVLQYFHKKI LENPSFYYAV  180
HLDYEELISN IFWADTQMIM DYAQFGDVVT FDITYKLNNE HRLFGTFVGF NHHQETVIFS  240
AALMYDKTTE SFTWLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-44FAR1 family protein