PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028113460.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 136aa    MW: 15199.5 Da    PI: 9.8326
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028113460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.41.9e-071191888
            FAR1  8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88
                    k++GF +++++s    +ng+  + t+   k+g+ ++++k + ++ r + ++++gC   l+ +k   +++w+++ l   HnH+
  XP_028113460.1 11 KKTGFVIVRKTSDAG-DNGKKSRLTLAYEKSGYYRDNRKIKGERLRLTGSKKCGCPFLLRGEKLPtNDEWMLHVLCGVHNHP 91
                    789******999887.8888**************999999899999999***********999988***************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MRVVTASDDG KKTGFVIVRK TSDAGDNGKK SRLTLAYEKS GYYRDNRKIK GERLRLTGSK  60
KCGCPFLLRG EKLPTNDEWM LHVLCGVHNH PSAEYLEGHS FAGRLSKEET SLLVDMSKSM  120
LATKRDIGYI ETKGCL