PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113493.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 831aa MW: 95805.2 Da PI: 7.1912

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.2	1.1e-22	70	159	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YAk GFs+r+++ +k k+n +++r +vCskeg r+++ + +e++r++++ tr+gC+a++++k ++ ++k+ev+++ +eHnH++ XP_028113493.1 70 RFYNSYAKVKGFSIRRDQLYKDKNNM-VISRSWVCSKEGCRQSKYLEvEERKREPKQLTRVGCRACFRIKYNRsTSKYEVNEFFKEHNHSM 159 5******************96666.9***********998867888899************999*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 831 aa Download sequence
MEDNTEQNKS NIIYELVDDD GNDGEYNIHN EDNIVNSNNI RTERDIKRLD ELTEKDVFEM 60 TFDSEENGER FYNSYAKVKG FSIRRDQLYK DKNNMVISRS WVCSKEGCRQ SKYLEVEERK 120 REPKQLTRVG CRACFRIKYN RSTSKYEVNE FFKEHNHSMI GPLGVQFLRS HRNVTSADKA 180 QGNAMHHIGM RTSHIMDFAA QQAGGYENVG FIQKDMYNHF GTERRAQVVD GDAESALAYL 240 CGKEEQNPMF YYKYDVDEEN RLNNLFWTDG GSRTDYLYFG DVLMFDTTYR TNAYNKPFVI 300 LQGVSNHFQT TVFGCALLAS ETVETYIWVL EKFLDAMDHK MPLSVITDGD KAMCRAIKTV 360 MPTARHRLCK WHLKMNALSN IHIEGFLHSF EKCMSMQCTQ EMFELEWKNL VDKYGLHNNK 420 WIADVYCKRT LWAEAYLHGH FFAGAKSTQR CESMNAFLNR FLKVRLRLFE FVRAYDRALA 480 RLRHNEAKAQ SETENTTPIL STGMKRIERH ATDIFTRAIF FKFREQIKFE QVLFMSGKTD 540 IEDIHVYYLS MYTHPESTWN VQYRPSDHAM KCSCLYFESC GIPCSHMVSI MKMEHLKEIP 600 SSCILERWTK NVKSSTLLGK TPFPEWVTQT TRFGALSSAC TEMCYYASHL TNGYEEAMDA 660 VTKLTCRMKD LYVQHVEGNG TKGKANVEGT CLHLGVGDSP FTKTKGSRSV ANDKFSKPRK 720 CGHCRGTGHT RNKCPKLENE NIDSFPTQDT YVSGASMLHQ EDGFNVDLTF TNSDYNIMGY 780 GSNGHPTFVG TDYNIMGCDS NIYPNFVVRT CSETPDSIYG RVVGGTIDLS K

Sequence ? help Back to Top

Protein Sequence Length: 831 aa Download sequence

MEDNTEQNKS NIIYELVDDD GNDGEYNIHN EDNIVNSNNI RTERDIKRLD ELTEKDVFEM  60
TFDSEENGER FYNSYAKVKG FSIRRDQLYK DKNNMVISRS WVCSKEGCRQ SKYLEVEERK  120
REPKQLTRVG CRACFRIKYN RSTSKYEVNE FFKEHNHSMI GPLGVQFLRS HRNVTSADKA  180
QGNAMHHIGM RTSHIMDFAA QQAGGYENVG FIQKDMYNHF GTERRAQVVD GDAESALAYL  240
CGKEEQNPMF YYKYDVDEEN RLNNLFWTDG GSRTDYLYFG DVLMFDTTYR TNAYNKPFVI  300
LQGVSNHFQT TVFGCALLAS ETVETYIWVL EKFLDAMDHK MPLSVITDGD KAMCRAIKTV  360
MPTARHRLCK WHLKMNALSN IHIEGFLHSF EKCMSMQCTQ EMFELEWKNL VDKYGLHNNK  420
WIADVYCKRT LWAEAYLHGH FFAGAKSTQR CESMNAFLNR FLKVRLRLFE FVRAYDRALA  480
RLRHNEAKAQ SETENTTPIL STGMKRIERH ATDIFTRAIF FKFREQIKFE QVLFMSGKTD  540
IEDIHVYYLS MYTHPESTWN VQYRPSDHAM KCSCLYFESC GIPCSHMVSI MKMEHLKEIP  600
SSCILERWTK NVKSSTLLGK TPFPEWVTQT TRFGALSSAC TEMCYYASHL TNGYEEAMDA  660
VTKLTCRMKD LYVQHVEGNG TKGKANVEGT CLHLGVGDSP FTKTKGSRSV ANDKFSKPRK  720
CGHCRGTGHT RNKCPKLENE NIDSFPTQDT YVSGASMLHQ EDGFNVDLTF TNSDYNIMGY  780
GSNGHPTFVG TDYNIMGCDS NIYPNFVVRT CSETPDSIYG RVVGGTIDLS K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-114	FAR1 family protein