PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113852.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 336aa MW: 38303 Da PI: 5.6616

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50	9.9e-16	59	144	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk++GF + ++++ + ++ge++ C++ r+++++ + +++ +t+++Cka+++ ++++dg++++t+++leH+H+l XP_028113852.1 59 FYAQYAKHCGFAIAFRSQNLT-TDGEVKYFGIECTRVRLRTKRSEI--NPLEPSLSTKIDCKARVRASLQNDGRYKLTTVVLEHTHDLI 144 9***********9998887.8999************9988..8999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MSVVFNFDTI MDIDSNNNSL NGSEEVEEQD NNLDINEIGE VEEPKKGMYF GSKQEVYAFY 60 AQYAKHCGFA IAFRSQNLTT DGEVKYFGIE CTRVRLRTKR SEINPLEPSL STKIDCKARV 120 RASLQNDGRY KLTTVVLEHT HDLIPADSWH FSINKRIRTP VKRRLEVNNA VGIGVARNFH 180 SIVVEAGGYE ALTFDERDAR NYIENARRLR LGLGDAESVT LYFHKMQQQN SNFYLAIDLD 240 EDGSMRNLFW ADARSRAAYK AFGDVVSFDT TYLTNKYDMS FAPFVGVNHH GQSILFGCGL 300 LSNENTETFV WLFKEWLSCM SDAPSKAIMT DQCRAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-61	FAR1 family protein