PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028113890.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 201aa    MW: 23350.9 Da    PI: 10.0951
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028113890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1232.6e-0749132887
            FAR1   8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnH 87 
                     k+ GF + +++s +   ++ + + ++ C+++gk +++kk     ++++ r + +++  C++ + +k ek   ++ w+++ +   HnH
  XP_028113890.1  49 KKNGFVIIVKYSDSG-GSRWTPRIKLACKRSGKYRQKKKVkfysHDENARITGTKK--CDCPFLLKDEKlspNNDWMLHVVCGVHNH 132
                     678999998887766.66668899*********99988877754444444444555..55555555555559*************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MGENFTHLNS ILENVEHVEC VLNYTSEFTT YEIFKSREAT INWARDVGKK NGFVIIVKYS  60
DSGGSRWTPR IKLACKRSGK YRQKKKVKFY SHDENARITG TKKCDCPFLL KDEKLSPNND  120
WMLHVVCGVH NHLAVDHLEG HSYLGRLSHQ ENELLVDMSK SMVRPKDILV TLKQRNPLNV  180
TTMKTIYNVR HRFKVKEKAG R