PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028113993.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 177aa    MW: 19757.4 Da    PI: 9.8031
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028113993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK50.44.3e-16111157450
          RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 
                     ei l+d+ ++ + +i+dAA +L+v+ ++LKr CR yG +RWP Rk k
  XP_028113993.1 111 EIPLDDILQNSKISIQDAADNLQVSRSTLKRVCRGYGFPRWPPRKKK 157
                     688999**************************************955 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MKKNFRTFKL ASGEELGRHL YIEEISFQNG EKLDSVQMSQ TTKSLPRLEP LQSGGEMTLL  60
DLSSQQSMDA LNNESNVVSA ERSNIDVTCS QEKGKTKRPK SVHNKTGVKI EIPLDDILQN  120
SKISIQDAAD NLQVSRSTLK RVCRGYGFPR WPPRKKKMVG SSQPSESSLG VDHQLIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.11e-10Nin-like family protein