PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114059.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 180aa    MW: 20818.1 Da    PI: 7.7683
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.56e-2547136190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y++++GFs+r+++ +k+k + + ++r +vC+keg+ + +k++   ++++ra+tr+gC+a+l vk+++   k++vt+++++HnH+++
  XP_028114059.1  47 DFYNTYGERMGFSIRINYCRKNKFTSQLICRLLVCNKEGFWKVDKRD-PLAKNPRAKTRIGCEAQLYVKLDEgIRKFVVTDFNEKHNHNIV 136
                     6******************************************9999.999*********************99**************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MEDNIGMMMM RMILTLLHFD MDMELENDCA WKPKQGMTFD SEQCAYDFYN TYGERMGFSI  60
RINYCRKNKF TSQLICRLLV CNKEGFWKVD KRDPLAKNPR AKTRIGCEAQ LYVKLDEGIR  120
KFVVTDFNEK HNHNIVSPEC AHMLPSQRKK SATQAIELDL AASGLHLGQS FELMGREASG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.14e-23FAR1 family protein