PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114065.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 240aa    MW: 27873.8 Da    PI: 7.1042
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind108.64.7e-34301212102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y ++e+++++++isw+++g+ fvv+++ +fa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv++++         weF ++ F+kg+++ll++
  XP_028114065.1  30 FLMKTYMLVEEPTTDQVISWNADGTGFVVWQPADFARDLLPTLFKHSNFSSFVRQLNTYGFRKVTTSR---------WEFCNDMFRKGERNLLCE 115
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_028114065.1 116 IRRRKA 121
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MMMMMEGGES VCEKGLAEYE MMRKSSPPPF LMKTYMLVEE PTTDQVISWN ADGTGFVVWQ  60
PADFARDLLP TLFKHSNFSS FVRQLNTYGF RKVTTSRWEF CNDMFRKGER NLLCEIRRRK  120
AWSNKAQPIP QMQPPKEVDE DQRSSSTSSS SAYTTLVDEN NRLKRENRVL SSELSTMKKK  180
CKELLDSVAM YASLEKEEEE DDERPKLFGV RLEVEGEREI KRMRAKISET ANILLSQTCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.11e-69HSF family protein